SecReT4
Protein ID: 159046180
T4SS name [ID]VirB [470]
Gene symbol-
Locus tagDshi_3638
StrainDinoroseobacter shibae DFL 12
Repliconplasmid pDSHI01 [GenBank: NC_009955] [Browse all T4SS(s) in this replicon]
Location [Strand]39177..39797 [+]
Productlytic transglycosylase
Component typeVirB1
UniProt IDA8LT04
KEGG IDdsh:Dshi_3638
PDB IDNA
Domain hit(s) vs Pfam NA
Protein Sequence: 206 a.a.     [Download]
>gi|159046180|ref|YP_001541852.1| lytic transglycosylase [Dinoroseobacter shibae DFL 12]
MVLVMESDGSLTPSRSQDSFARNYHDGIGQGSAADELAIFGSDETVPEREAMRFAARVGPAPLPHPDVLN
AIETTALRYASHPGLRRAELSVTDWLSLYRANIEVESAYRQDAVSRAGAIGLGQLMPDTARDLGVDPRDP
QQNLDGSARYLAMMLESFGDPHLALAAYNAGPEAVRQHGGIPPYRETQNHVARVMAVVARLEGSNS
 
Nucleotide Sequence: 621 bp     [Download]
>gi|159046135|ref|NC_009955.1|:39177-39797 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence
ATGGTACTGGTCATGGAGAGCGATGGCTCTCTGACCCCTTCTCGCTCCCAGGACAGCTTTGCCCGCAATT
ACCATGACGGCATCGGCCAGGGATCGGCAGCCGATGAACTTGCGATTTTCGGCAGCGATGAAACTGTGCC
AGAGCGTGAAGCGATGCGCTTTGCAGCCCGTGTCGGGCCGGCACCCCTGCCCCACCCCGATGTCCTAAAC
GCCATAGAGACCACGGCCCTGCGCTATGCCAGCCACCCCGGCCTAAGGCGCGCGGAGCTTTCCGTCACGG
ACTGGCTGAGCCTCTACCGCGCCAATATCGAAGTGGAGAGCGCATATCGGCAGGATGCGGTCTCCCGTGC
GGGCGCCATTGGCCTTGGTCAGCTTATGCCCGACACCGCGCGCGACCTCGGCGTCGACCCGCGCGATCCA
CAACAGAACCTCGACGGTTCCGCTCGCTACCTTGCGATGATGCTGGAAAGCTTCGGCGATCCGCATCTGG
CGCTTGCCGCCTACAACGCTGGGCCGGAAGCCGTGCGCCAACACGGTGGCATTCCCCCTTACCGAGAAAC
CCAGAACCACGTGGCCCGCGTCATGGCCGTTGTGGCCCGATTGGAAGGATCAAATTCATGA

Protein ID: 159046185
T4SS name [ID]VirB [470]
Gene symbol-
Locus tagDshi_3643
StrainDinoroseobacter shibae DFL 12
Repliconplasmid pDSHI01 [GenBank: NC_009955] [Browse all T4SS(s) in this replicon]
Location [Strand]42877..44031 [+]
Productlytic transglycosylase catalytic
Component typeVirB1
UniProt IDA8LT09
KEGG IDdsh:Dshi_3643
PDB IDNA
Domain hit(s) vs Pfam NA
Protein Sequence: 384 a.a.     [Download]
>gi|159046185|ref|YP_001541857.1| lytic transglycosylase catalytic [Dinoroseobacter shibae DFL 12]
MKCRLRHILALCLLPGAAFSQGVPTNDSGLTARDIVETGDREADLAIQADKLSVRELIAEIEREQLATLQ
RILDAQSSFGGQGLPAMVSGLESGSGDPDRAVEAVYGTGEIDPNRGGAQMFGDASENIEQLIIRVAQETS
GFAGVGRAGLSPVQWRALLQALIWQESRFTIGARSPVGAFGLTQIMPGTASDLGINPDYYDSPYLQVHGG
ARYLATQLNTFDGNIINALAAYNAGPGRVFEYGGVPPFRETQHYVQVIPERYNLYLSRIGGIEALGTIDP
ALLANANLSITGHGAAFYGSNSPAAIRQAALRIADIVERISETEDMQESVALNTYARAELVRLVAARIRL
QAARTRVLSAEELAQASARMAEGAFMEFTIREID
 
Nucleotide Sequence: 1155 bp     [Download]
>gi|159046135|ref|NC_009955.1|:42877-44031 Dinoroseobacter shibae DFL 12 plasmid pDSHI01, complete sequence
TTGAAGTGTAGGCTGCGTCATATCCTGGCCCTTTGCCTGCTGCCTGGCGCCGCCTTTTCCCAAGGTGTGC
CGACCAATGACAGCGGGTTGACCGCGCGCGATATCGTCGAGACCGGCGATCGAGAGGCCGACCTCGCCAT
TCAAGCGGACAAGCTCTCGGTGCGAGAACTCATCGCCGAAATCGAACGGGAGCAATTGGCCACCCTGCAG
CGCATCCTCGATGCCCAGAGCAGCTTCGGCGGTCAGGGCCTGCCGGCCATGGTCTCCGGGCTGGAAAGTG
GCAGCGGCGATCCCGACCGCGCCGTGGAAGCCGTCTATGGCACGGGCGAGATCGATCCCAATCGCGGCGG
TGCGCAGATGTTCGGGGATGCGTCTGAGAACATCGAGCAACTCATCATCCGCGTCGCCCAGGAAACCAGC
GGCTTTGCCGGCGTTGGCCGCGCGGGCCTCTCCCCGGTTCAATGGCGCGCACTCCTACAGGCGCTCATCT
GGCAGGAAAGCCGGTTTACCATCGGCGCGCGCTCGCCGGTCGGCGCCTTTGGCCTCACCCAGATCATGCC
TGGGACGGCCAGCGATCTCGGCATCAACCCGGATTACTATGACAGCCCCTACCTGCAGGTGCATGGCGGC
GCGCGCTATCTCGCCACCCAGCTCAACACCTTCGATGGCAACATCATCAACGCCCTCGCGGCCTATAATG
CCGGCCCCGGCCGGGTCTTTGAATATGGCGGGGTCCCACCTTTCCGCGAAACCCAGCACTACGTCCAGGT
CATCCCCGAGCGCTACAATCTCTATCTGAGCCGCATCGGCGGGATCGAAGCGCTCGGAACGATCGATCCG
GCGCTTCTGGCCAATGCCAACCTCTCGATCACCGGGCATGGCGCGGCCTTCTATGGCAGCAACTCCCCCG
CTGCGATCAGGCAGGCCGCCCTGCGCATTGCGGATATCGTCGAGCGGATTTCTGAGACGGAAGACATGCA
GGAAAGCGTCGCGCTCAACACCTATGCCCGCGCCGAACTCGTGCGTCTCGTCGCCGCGCGTATTCGTCTT
CAAGCGGCACGGACCCGCGTGCTTTCGGCCGAGGAATTGGCACAGGCCAGCGCCCGCATGGCCGAGGGCG
CATTCATGGAATTCACGATCAGGGAGATAGACTGA